Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931342.1_cds_XP_016478168.1_69834
CDS Infomation

[gene=LOC107799556] [db_xref=GeneID:107799556] [protein=geranylgeranyl pyrophosphate synthase, chloroplastic-like] [protein_id=XP_016478168.1] [location=complement(8004..9095)] [gbkey=CDS]
Sequence

ATGAGTCTTTCTACAGCAATTACAACATGGGGCAACACCCATTTTGCCCTTGGAAATAAC
GGCAGATCCAGATTTTCCTCTCATGGATTCTTGCTTCCTAATCTGAAGATCAAATTCTAT
ACCAACAACCCTTCTCCTCTTTCTATCTCAGCTCTTCTTACAACAAAACAACAAACTGAT
GAAAGCAAGAACAAGAAAAAACAAGCAATGGAGTTCAATGAATACGTTCTTGAAAAAGCT
AATTCTGTGAACAAGGCTTTGGAATCTTCAGTCTTGATTAAAGACCCAGTCAAGATTCAT
GAATCCATGAGATATTCTCTTCTTGCCGGTGGGAAAAGAATCCGACCCATGTTGTGTATA
GCCTCTTGTGAACTTGTTGGTGGAGATGAGTCCACAGCTATGCCTGCAGCTTGTGCTGTT
GAGATGATTCACACCATGTCTTTGATACATGATGATCTTCCTTGTATGGATAATGATGAT
CTTAGAAGAGGGAAACCTACAAATCACAAGATTTATGGCGAGGACGTTGCTGTTTTAGCA
GGGGATGCACTTCTTGCATTAGCTTTTGAGCACATTGCTACTCAAACAAAAGGGGTTCCT
TCACATAGGATTGTAAGGGTAATTGGTGAGTTAGCTAAATGTATTGGTGCTGAGAGGCTT
GTAGCTGGGCAAGTTGTAGATATAATTTCTGAGGGGATTTCTGATGTTGATTTGAAGCAT
TTAGAGTTCATTCATTTGCACAAGACTGCAGCTTTATTAGAAGGGTCAGTGGTGTTAGGG
GCTATATTAGGAGGGGCAGATGCTGAAGAAGTGGAGAAGTTAAGGAAGTTTGCAAGGTGT
ATTGGGTTGTTATTTCAAGTTGTGGATGATATTCTTGATGTTACAAAGTCTTCTCAACAA
TTGGGGAAGACAGCAGGGAAAGACTTAGTTGCTGATAAGGTAACTTATCCCAAACTGATT
GGTATTGACAAGTCTAGGGACTTTGCTGAGGAGTTAAACAAAGAAGCTCAAGCTCAGCTT
GCTGGATTTGATCAAGAGAAAGCAGCTCCATTGATTGCTCTTGCAAATTATATTGCTTAT
AGAGAAAACTGA

Peptide Sequence

PEP ID

XP_016478168.1
PEP Infomation

PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MSLSTAITTWGNTHFALGNNGRSRFSSHGFLLPNLKIKFYTNNPSPLSISALLTTKQQTD
ESKNKKKQAMEFNEYVLEKANSVNKALESSVLIKDPVKIHESMRYSLLAGGKRIRPMLCI
ASCELVGGDESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA
GDALLALAFEHIATQTKGVPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKH
LEFIHLHKTAALLEGSVVLGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQ
LGKTAGKDLVADKVTYPKLIGIDKSRDFAEELNKEAQAQLAGFDQEKAAPLIALANYIAY
REN

Transcript Sequence

Gene sequence data has not been registered.